coMET: coMET: visualisation of regional epigenome-wide association scan (EWAS) results and DNA co-methylation patterns
Version 1.12.0

Visualisation of EWAS results in a genomic region. In addition to phenotype-association P-values, coMET also generates plots of co-methylation patterns and provides a series of annotation tracks. It can be used to other omic-wide association scans as long as the data can be translated to genomic level and for any species.

Package details

AuthorTiphaine C. Martin [aut,cre], Thomas Hardiman [aut], Idil Yet [aut], Pei-Chien Tsai [aut], Jordana T. Bell [aut]
Bioconductor views ChIPSeq DNAMethylation DNASeq DifferentialMethylation ExomeSeq FunctionalGenomics Genetics GenomeWideAssociation MethylSeq MethylationArray Microarray MotifAnnotation RNASeq RiboSeq Sequencing Software Visualization
MaintainerTiphaine Martin <[email protected]>
LicenseGPL (>= 2)
Version1.12.0
URL http://epigen.kcl.ac.uk/comet
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("coMET")

Try the coMET package in your browser

Any scripts or data that you put into this service are public.

coMET documentation built on May 2, 2018, 4:21 a.m.