Man pages for coRNAi
Analysis of co-knock-down RNAi data
| BoxPlotShorth | Boxplot with horizontal bars at the midpoint of the shorth |
| cellHTS2df | converts cellHTS objects to dataframes |
| cortestmatrices | Function to extract correlations and corresponding p-values... |
| data2graph | Function to create .dot files for graph representation of... |
| df2array | function to do go from data frame to an array with values |
| df2fitmatrix | matrix for lmFit from dataframe |
| df2lmFit | lmFit from dataframe |
| estmodel | Function to do estimate the main effects from data using... |
| faultyscreen | faulty screen |
| InteractGraph | functions to visualize interactions as a graph |
| interactiontable | Returns a list of interactions with associated statistics. |
| InteractLevelPlot | function to visualize interactions as a levelplot |
| key | A key to data set screen1, contains (additional) information... |
| MainFitPlot | Diagnostic plot |
| PlotHeatmap | Plot a heatmap of interactions |
| Pplot | Function to plot cumulative p-values |
| repplots | reproducibility plots |
| rlmmain | main effect estimation |
| screen1_raw | screen1 raw data |
| screen2_raw | screen2 raw data |
| signalplots | plot variation vs signal intensity |
| tt2matrix | Extracting data from a toptable and format it to matrix |
| updateDf | updates dataframe after fitting of main estimates |
| weightDf | Function to indicate which data points should be involved in... |
