df2fitmatrix: matrix for lmFit from dataframe
In coRNAi: Analysis of co-knock-down RNAi data
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
converts a dataframe into the right format for lmFit
function
Usage
1
Arguments
df
dataframe from cellHTS2df function
Value
A matrix with the genepairs as rows and the replicates as
columns. This matrix is in the right format for the lmFit.
Author(s)
Elin Axelsson
See Also
Examples
1
2
3
4
5
6
7
data(screen1_raw)
df = cellHTS2df(screen1_raw,neutral="Fluc")
df = weightDf(df)
lmm = lmmain(df)
df = updateDf(df,lmm)
mfit = df2fitmatrix(df)
head(mfit)
coRNAi documentation built on Nov. 17, 2017, 11:14 a.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
converts a dataframe into the right format for lmFit function
Usage
1 |
Arguments
df |
dataframe from cellHTS2df function |
Value
A matrix with the genepairs as rows and the replicates as
columns. This matrix is in the right format for the lmFit.
Author(s)
Elin Axelsson
See Also
Examples
1 2 3 4 5 6 7 | data(screen1_raw)
df = cellHTS2df(screen1_raw,neutral="Fluc")
df = weightDf(df)
lmm = lmmain(df)
df = updateDf(df,lmm)
mfit = df2fitmatrix(df)
head(mfit)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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