Psoriasis: Psoriasis dataset.

Description Format Source

Description

An example dataset of Psoriasis. This dataset is used for illustration of the usage of cogena package. It has been normalised the expression profling using rma method, filtered some non-informative genes using MetaDE package and analysed the differentially expressed genes using limma package with the cut-off adjuested p-value 0.05 and abs(logFC) >=1.

Format

two objects: DEexprs and sampleLabel.

DEexprs

expression of DEG. There are 706 DEGs and 116 samples.

sampleLabel

the label of sample, There are 58 control and 58 Psoriasis.

Source

http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE13355


cogena documentation built on May 20, 2017, 10:08 p.m.

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