Files in compEpiTools

Tools for computational epigenomics

R/GRmidpoint.R R/GRcoverageSummit.R R/makeGtfFromDb.R R/GRenrichment.R R/matchEnhancers.R R/featuresLength.R R/getPromoterClass.R R/topGOres.R R/findLncRNA.R R/heatmapPlot.R R/palette2d.R R/unionMaxScore.R R/countOverlapsInBins.R R/GRcoverage.R R/overlapOfGRanges.R R/GRannotate.R R/stallingIndex.R R/ucsc2GRanges.R R/GRsetwidth.R R/distanceFromTSS.R R/TSS.R R/GRanges2ucsc.R R/GR2fasta.R R/enhancers.R R/simplifyGOterms.R R/GRangesInPromoters.R R/GRannotateSimple.R R/heatmapData.R R/plotStallingIndex.R R/GRbaseCoverage.R R/GRcoverageInbins.R man/GRanges2ucsc-methods.Rd man/GRcoverage-methods.Rd man/compEpiTools-package.Rd man/enhancers.Rd man/overlapOfGRanges-methods.Rd man/simplifyGOterms.Rd man/GRsetwidth.Rd man/findLncRNA.Rd man/heatmapData.Rd man/GRannotate-methods.Rd man/GRangesInPromoters-methods.Rd man/getPromoterClass-methods.Rd man/GRmidpoint-methods.Rd man/palette2d.Rd man/countOverlapsInBins-methods.Rd man/matchEnhancers.Rd man/ucsc2GRanges.Rd man/stallingIndex.Rd man/topGOres.Rd man/heatmapPlot.Rd man/GRcoverageSummit-methods.Rd man/GR2fasta-methods.Rd man/GRannotateSimple.Rd man/plotStallingIndex.Rd man/distanceFromTSS-methods.Rd man/makeGtfFromDb.Rd man/TSS.Rd man/GRenrichment-methods.Rd man/GRbaseCoverage-methods.Rd man/unionMaxScore-methods.Rd inst/doc/compEpiTools.R inst/doc/compEpiTools.pdf