CNV.data-class: CNV.data class

In conumee: Enhanced copy-number variation analysis using Illumina DNA methylation arrays

Description

Intensities of one or multiple samples are stored in this class.

Usage

## S4 method for signature 'CNV.data'
show(object)

## S4 method for signature 'CNV.data,ANY,ANY,ANY'
x[i]

## S4 method for signature 'CNV.data'
names(x)

## S4 replacement method for signature 'CNV.data'
names(x) <- value

Arguments

object	CNV.data object
x	CNV.data object (defined by Extract generic).
i	index. logical, numeric or character.
value	Replacement names.

Details

Use CNV.load to create.

Value

CNV.data class.

Author(s)

Volker Hovestadt [e-mail]

Examples

# create object
library(minfiData)
data(MsetEx)

d <- CNV.load(MsetEx)

# general information
d
show(d)

# show or replace sample names
names(d)
names(d) <- toupper(names(d))

# subset samples
d[1:2]

conumee documentation built on Nov. 8, 2020, 6 p.m.