Files in cytomapper
Visualization of highly multiplexed imaging data in R
NEWS
README.md
NAMESPACE
.BBSoptions
DESCRIPTION
R/CytoImageList-class.R
R/cytomapperShiny.R
R/AllGenerics.R
R/subsetting-utils.R
R/CytoImageList-utils.R
R/data.R
R/CytoImageList.R
R/validityChecks.R
R/shiny-ui.R
R/plotting-param.R
R/shiny-server.R
R/plotCells.R
R/namespace.R
R/plotting-utils.R
R/plotPixels.R
R/validityChecksShiny.R
R/loadImages.R
R/server-utils.R
inst/CITATION
inst/doc/cytomapper.Rmd
inst/doc/cytomapper.html
inst/doc/cytomapper.R
inst/extdata/J02_imc.tiff
inst/extdata/J02_mask.tiff
inst/extdata/G01_imc.tiff
inst/extdata/G01_mask.tiff
inst/extdata/E34_mask.tiff
inst/extdata/E34_imc.tiff
inst/imgs/cytomapper_sticker.png
inst/scripts/README.md
inst/scripts/1_LoadPancreasData.Rmd
inst/scripts/3_GenerateToyData.Rmd
inst/scripts/2_LoadPancreasImages.Rmd
build/vignette.rds
tests/testthat.R
tests/testthat/test_shiny_reactive.R
tests/testthat/test_validity.R
tests/testthat/test_CytoImageList-subsetting.R
tests/testthat/test_plotting-param.R
tests/testthat/test_plotCells.R
tests/testthat/test_plotting-param-validity.R
tests/testthat/test_plotPixels.R
tests/testthat/test_CytoImageList-manipulation.R
tests/testthat/test_loadImages.R
tests/testthat/test_CytoImageList.R
tests/testthat/test_plotting-utils.R
tests/testthat/test_CytoImageList-naming.R
tests/testthat/test_shiny_functions.R
tests/testthat/test_shiny_ui.R
tests/testthat/_snaps/shiny_snapshots.md
vignettes/cytomapper.Rmd
vignettes/library.bib
data/pancreasImages.RData
data/pancreasSCE.RData
data/pancreasMasks.RData
man/cytomapperShiny.Rd
man/CytoImageList-naming.Rd
man/CytoImageList.Rd
man/pancreasImages.Rd
man/plotCells.Rd
man/CytoImageList-manipulation.Rd
man/plotting-param.Rd
man/loadImages.Rd
man/pancreasSCE.Rd
man/CytoImageList-subsetting.Rd
man/pancreasMasks.Rd
man/plotPixels.Rd
