exomeCopy
Copy number variant detection from exome sequencing read depth

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exomeCopy: Copy number variant detection from exome sequencing read depth
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Files in exomeCopy
Copy number variant detection from exome sequencing read depth

NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
src/exomeCopy.c
data/exomecounts.rda
R/helper_functions.R R/classes.R R/main_functions.R R/methods.R
vignettes/exomeCopy.Rnw
vignettes/exomeCopy.bib
man/plotCompiledCNV.Rd man/subdivideGRanges.Rd man/generateBackground.Rd man/ExomeCopy-class.Rd man/exomeCopy-package.Rd man/getGCcontent.Rd man/exomecounts.Rd man/compileCopyCountSegments.Rd man/exomeCopy.Rd man/copyCountSegments.Rd man/countBamInGRanges.Rd man/negLogLike.Rd man/plot.exomeCopyObject.Rd
inst/doc/exomeCopy.Rnw
inst/doc/exomeCopy.R inst/doc/exomeCopy.pdf
inst/extdata/targets.bed
inst/extdata/reference.fa
inst/extdata/mapping.bam
inst/extdata/mapping.sam
inst/extdata/mapping.bam.bai
inst/extdata/reference.fa.fai
inst/extdata/1000Genomes_files.txt
exomeCopy documentation built on Nov. 8, 2020, 7:45 p.m.

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