GCsizeFactors-methods: Method GCsizeFactors

In exomePeak2: Bias Awared Peak Calling and Quantification for MeRIP-Seq

Description

Method GCsizeFactors

Method GCsizeFactors<-

Accessor to the slot GCsizeFactors in class SummarizedExomePeak.

Accessor to the slot GCsizeFactors in class SummarizedExomePeak.

Usage

GCsizeFactors(x1)

GCsizeFactors(x2) <- value

## S4 method for signature 'SummarizedExomePeak'
GCsizeFactors(x1)

## S4 replacement method for signature 'SummarizedExomePeak'
GCsizeFactors(x2) <- value

Arguments

x1	A SummarizedExomePeak object.
x2	A SummarizedExomePeak object.
value	A matrix object.

Value

a data.frame for the GC content size factors of each sample

Examples

f1 = system.file("extdata", "sep_ex_mod.rds", package="exomePeak2")

sep <- readRDS(f1)

head(GCsizeFactors(sep))

exomePeak2 documentation built on Nov. 8, 2020, 5:27 p.m.