reads_five_POS_rev: extract reads five prime POS and reverse its strand.

In exomePeak2: Bias Awared Peak Calling and Quantification for MeRIP-Seq

Description

extract reads five prime POS and reverse its strand.

Usage

reads_five_POS_rev(reads, width = 1, fix = "start", ...)

Arguments

reads	a GAlignmentList object.
width	the width of the five prime POS.
fix	the end of the POS, start means 5', end means 3'.
...	arguments path to function resize.

Value

the resized reads GRanges for reversed 5' POS positions.

exomePeak2 documentation built on Nov. 8, 2020, 5:27 p.m.