evaluateProcess: Evaluate QA processes

In flowQ: Quality control for flow cytometry

Description

Re-evaluate an object of class qaProcess, e.g. for the case that a threshold value has changed.

Usage

evaluateProcess(process, thresh, ...)

Arguments

process	An object of class qaProcess.
thresh	The new treshold on which the process is to be evaluated.
...	Further arguments that are passed on to the individual functions for each QA process type.

Details

It is sometimes useful to update the state of aggregators in a qaProcess , for instances after changing the threshold value, without having to recompute all images, which can be very time consuming.

Value

An updated object of class qaProcess

Note

This function needs to be extended for new types of qaProcess.

Author(s)

Florian Hahne

See Also

qaProcess, writeQAReport

Examples

## Not run: 
data(GvHD)
dest <- tempdir()
qp1 <- qaProcess.timeline(GvHD[1:3], channel="FL1-H", outdir=dest,
         cutoff=1)
evaluateProcess(qp1, thresh=4)

## End(Not run)

flowQ documentation built on Nov. 1, 2018, 3:38 a.m.