qaProcess-class: Abstraction of the results of a QA process

In flowQ: Quality control for flow cytometry

Description

QA processes create graphical output which can be bundled in a single HTML document. This class stores all information that is needed by writeQAReport to produce such HTML reports.

Objects from the Class

Objects should be created using the constructor functions. See qaProcess.timeline and qaProcess.marginevents for details. When writing new QA process functions, the constructors qaProcessFrame and qaProcess should be used. The latter expects the mandatory arguments id, type and frameProcesses and also accepts the optional arguments name and summaryGraph. See the vignette of this package for details.

Slots

id:

Object of class "character", the objects unique identifier

name:

Object of class "character", the name of the process

type:

Object of class "character", the type of process

frameIDs:

Object of class "character", the identifiers of the flowSets to which the subprocesses are linkes

summaryGraph:

Object of class "qaGraph", a graphical summary of the processe's outcome

frameProcesses:

Object of class "list", more detailed information for each flowFrame

Methods

initialize

signature(.Object = "qaProcess"): constructor

Author(s)

Florian Hahne

See Also

qaGraphList, writeQAReport, qaProcessFrame

Examples

showClass("qaProcess")

flowQ documentation built on Nov. 1, 2018, 3:38 a.m.