Provides quality control and quality assessment tools for flow cytometry data.
|Author||R. Gentleman, F. Hahne, J. Kettman, N. Le Meur, N. Gopalakrishnan|
|Date of publication||None|
|Maintainer||Mike Jiang <email@example.com>|
aggregatorList-class: Class "aggregatorList"
binaryAggregator-class: Class "binaryAggregator"
discreteAggregator-class: Class "discreteAggregator"
evaluateProcess: Evaluate QA processes
factorAggregator-class: Class "factorAggregator"
flowQ-package: Quality control for flow cytometry
locateDuplicatedParameters: Locate Duplicated Parameters
normalizeSets: Locate Duplicated Parameters
numericAggregator-class: Class "numericAggregator"
outlier-class: Virtual Class "outlier"
outlierResult-class: Class "outlierResult"
outliers-methods: ~~ Methods for Function outliers in Package '.GlobalEnv' ~~
preProcessFlowList: Preprocess a list of flowSets to add empty flowFrames for...
qaAggregator-class: Abstraction of the possible outcomes of a QA process
qaGraph-class: Class "qaGraph"
qaGraphList-class: Class "qaGraphList"
qaProcess.2DStatsPlot: Creates a QA process for 2D summary statistic comparisons...
qaProcess.BoundaryPlot: Creates a QA process for comparison of the percentage of...
qaProcess.cellnumber: Create QA process of type 'cellnumber'
qaProcess-class: Abstraction of the results of a QA process
qaProcess.DensityPlot: Creates a QA process for comparisons of density plots across...
qaProcess.ECDFPlot: Creates a QA process for comparisons of ECDF's across...
qaProcessFrame-class: Class "qaProcessFrame"
qaProcess.KLDistPlot: Creates a QA process for comparisons of KL Distances across...
qaProcess.marginevents: Create QA process of type 'marginevents'
qaProcessSummary-class: Class "qaProcessSummary"
qaProcess.timeflow: Create QA process of type 'timeflow'
qaProcess.timeline: Create QA process of type 'timeline'
qaReport: Create HTML report using one or several QA process...
qData: Data for demonstrating QA processes that compares dye...
rangeAggregator-class: Class "rangeAggregator"
stringAggregator-class: Class "stringAggregator"
txtFormatQAObject: Formats results contained in QA process objects into a data...
validProcess: Validate a QAProcess object
writeQAReport: Create HTML report for (lists of) qaProcess objects
writeQATextReport: Create tab delimited text files for (lists of) qaProcess...