writeQATextReport: Create tab delimited text files for (lists of) qaProcess...

Description Usage Arguments Details Value Author(s) See Also Examples

View source: R/qaReport.R

Description

This function combines all the results of multiple QA processes for one or several flowSets in a single tab delimited text document.

Usage

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writeQATextReport(set, processes=NULL, globalProcess=NULL, 
              fileName="textReport.txt")

Arguments

set

A flowSet or a list of several flowSets.

processes

A list of qaProcess objects or, in the case of multiple flowSets, a list of lists of qaProcess objects. See below for further details.

globalProcess

A list of qaProcess objects generated by multipanel comparison qaProcess functions, when set is a list of flowSets .

fileName

A character vector for the name of the file.

Details

Qunatitative or qualitative results are stored in objects of class qaProcess. writeQATextReport takes lists of such objects and combines their information in a tab delimited text document. In the case of multiple panels, a list of flowSets can be given to writeQAReport, and the function expects a list of lists of processes, where each process list is specific to one panel.

Value

The function is mostly called for it's side effects, that is, the generation of a tab delimited text file. .

Author(s)

Nishant Gopalakrishnan

See Also

qaProcess.marginevents, qaReport, qaProcess, qaProcess.timeline

Examples

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## Not run: 
  data(qData)
  p1 <- qaProcess.marginevents(qData[[1]],
          channels=c("FSC-A", "SSC-A"), outdir=tempdir(),
          name=paste("Panel",1,sep="_")) 
  writeQATextReport(qData[[1]], processes=list(p1), fileName="test.txt")

## End(Not run)

flowQ documentation built on May 31, 2017, 11:03 a.m.