ploidy: Guess the ploidy of a given flowframe
In flowTime: Annotation and analysis of biological dynamical systems using flow cytometry
Description
Usage
Arguments
Value
Examples
Description
Use the FSC.A/FSC.H ratio. Diploids are typically 5um x 6um
ellipsoids while haploids are typically 4um x 4um spheroids. As a result,
diploids are longer and you get a larger 'area/volume' FSC.A. 'Width' might
also be useful on certain cytometers.
Usage
1
ploidy(flowframe)
Arguments
flowframe
the flowFrame you would like to identify the ploidy of
Value
"Diploid" or "Haploid" and the mean FSC.A/FSC.H quotient
Examples
1
2
3
dat <- read.flowSet(path = system.file("extdata", "ss_example",
package = "flowTime"), alter.names = TRUE)
ploidy(dat$A01.fcs)
flowTime documentation built on Nov. 8, 2020, 8:13 p.m.
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Description Usage Arguments Value Examples
Description
Use the FSC.A/FSC.H ratio. Diploids are typically 5um x 6um ellipsoids while haploids are typically 4um x 4um spheroids. As a result, diploids are longer and you get a larger 'area/volume' FSC.A. 'Width' might also be useful on certain cytometers.
Usage
1 | ploidy(flowframe)
|
Arguments
flowframe |
the flowFrame you would like to identify the ploidy of |
Value
"Diploid" or "Haploid" and the mean FSC.A/FSC.H quotient
Examples
1 2 3 | dat <- read.flowSet(path = system.file("extdata", "ss_example",
package = "flowTime"), alter.names = TRUE)
ploidy(dat$A01.fcs)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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