qaGating: Quality assurance check
In flowTime: Annotation and analysis of biological dynamical systems using flow cytometry
Description
Usage
Arguments
Value
Examples
View source: R/generalFunctions.R
Description
Check whether a flowSet (or a single flowFrame) contains empty
values, in which case normalization may fail (divide by zero). This is
particularly useful for removing wash wells from a flowSet.
Usage
1
qaGating(x, threshold = 100)
Arguments
x
flowSet or flowFrame to be checked
threshold
flowFrames with fewer events than this threshold
will be identified.
Value
A vector containing the flowFrames with fewer events than
the threshold.
Examples
1
2
3
plate1<-read.flowSet(path = system.file("extdata", "ss_example", package =
"flowTime"), alter.names = TRUE)
qaGating(plate1)
flowTime documentation built on Nov. 8, 2020, 8:13 p.m.
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Description Usage Arguments Value Examples
View source: R/generalFunctions.R
Description
Check whether a flowSet (or a single flowFrame) contains empty values, in which case normalization may fail (divide by zero). This is particularly useful for removing wash wells from a flowSet.
Usage
1 | qaGating(x, threshold = 100)
|
Arguments
x |
|
threshold |
|
Value
A vector containing the flowFrames with fewer events than
the threshold.
Examples
1 2 3 | plate1<-read.flowSet(path = system.file("extdata", "ss_example", package =
"flowTime"), alter.names = TRUE)
qaGating(plate1)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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