make.swap: Swap analysis

In genArise: Microarray Analysis tool

Description

Read both files, but only extract the interested columns and create a Spot object.

Usage

make.swap(spot1, spot2, Cy3, Cy5, BgCy3, BgCy5, Id, Symdesc, header = FALSE, is.ifc = FALSE,envir,nr,nc)

Arguments

spot1	a connection or a character string giving the name of the file to read where each column represent the spot components.
spot2	a connection or a character string giving the name of the file to read where each column represent the spot components.
Cy3	column that represent Cy3.
Cy5	column that represent Cy5.
BgCy3	column that represent BgCy3.
BgCy5	column that represent BgCy5.
Id	column that represent Id.
Symdesc	optional identifier besides the Id column.
header	the logical value of the header input file
is.ifc	If is.ifc = TRUE this experiment was done in the Unit of Microarray from Cellular Phisiology Institute.
envir	Environment where are the genArise variables.
nr	Total of meta-row.
nc	Total of meta-column.

See Also

write.spot.

genArise documentation built on Nov. 8, 2020, 6:29 p.m.