spotUnique: Replicate filtering
In genArise: Microarray Analysis tool
Description
Usage
Arguments
Value
Examples
Description
We consider replicate measures of two samples and adjust the
log(ratio,2) measures for each gene so that the transformed values are
equal. To do this we take the geometric mean.\
This procedure can be extended to averaging over n replicates.
Usage
1
spotUnique(mySpot)
Arguments
mySpot
Spot object for one microarray.
Value
Spot object without duplicates
Examples
1
2
3
4
data(Simon)
c.spot <- bg.correct(Simon)
f.spot <- filter.spot(c.spot)
spotUnique(mySpot = f.spot)
genArise documentation built on Nov. 8, 2020, 6:29 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
We consider replicate measures of two samples and adjust the
log(ratio,2) measures for each gene so that the transformed values are
equal. To do this we take the geometric mean.\
This procedure can be extended to averaging over n replicates.
Usage
1 | spotUnique(mySpot)
|
Arguments
mySpot |
Spot object for one microarray. |
Value
Spot object without duplicates
Examples
1 2 3 4 | data(Simon)
c.spot <- bg.correct(Simon)
f.spot <- filter.spot(c.spot)
spotUnique(mySpot = f.spot)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.