geneplast-package: Geneplast: an R package for evolutionary rooting and...

Description Details Author(s) References

Description

Geneplast is designed for evolutionary and plasticity analysis based on orthologous groups distribution in a given species tree. It uses Shannon information theory and orthologs abundance to estimate the Evolutionary Plasticity Index. Additionally, it implements the Bridge algorithm to determine the evolutionary root of a given gene based on its orthologs distribution.

Details

Package: geneplast
Type: Package
Version: 1.0
Date: 2016-06-10
License: GPL (>= 2)

R package for gene plasticity inference based on orthologous groups distribution.

Author(s)

Rodrigo JS Dalmolin, Mauro AA Castro.

References

Dalmolin RJS et al. Geneplast: an R package for gene plasticity inference based on orthologous groups distribution. Journal paper (in preparation).


geneplast documentation built on Nov. 1, 2018, 2:27 a.m.