Geneplast is designed for evolutionary and plasticity analysis based on orthologous groups distribution in a given species tree. It uses Shannon information theory and orthologs abundance to estimate the Evolutionary Plasticity Index. Additionally, it implements the Bridge algorithm to determine the evolutionary root of a given gene based on its orthologs distribution.
|License:||GPL (>= 2)|
R package for gene plasticity inference based on orthologous groups distribution.
Rodrigo JS Dalmolin, Mauro AA Castro.
Dalmolin RJS et al. Geneplast: an R package for gene plasticity inference based on orthologous groups distribution. Journal paper (in preparation).
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