gplast.get: Get information from individual slots in an OGP object.
In geneplast: Evolutionary and plasticity analysis of orthologous groups

Description Usage Arguments Value Author(s) Examples

Get information from individual slots in an OGP object and any available results from previous analysis.

1	gplast.get(object, what="status")

`object`	an object of class 'OGP' `OGP-class`.
`what`	a single character value specifying which information should be retrieved from the slots. Options: "cogids", "sspids", "orthodist", "results", and "status".

slot content from an object of class 'OGP' OGP-class.

Rodrigo Dalmolin, Mauro Castro

#load datasets used for demonstration
data(gpdata.gs)

#create and object of class 'OGP'
ogp <- gplast.preprocess(cogdata=cogdata, sspids=sspids, cogids=cogids)

## run the gplast function
## this example uses the especies/COGs listed in the gpdata object
ogp <- gplast(ogp)
res <- gplast.get(ogp,what="results")