geneplast: Evolutionary and plasticity analysis based on orthologous groups distribution
Version 1.2.0

Geneplast is designed for evolutionary and plasticity analysis based on orthologous groups distribution in a given species tree. It uses Shannon information theory and orthologs abundance to estimate the Evolutionary Plasticity Index. Additionally, it implements the Bridge algorithm to determine the evolutionary root of a given gene based on its orthologs distribution.

Package details

AuthorRodrigo Dalmolin, Mauro Castro
Bioconductor views GeneRegulation Genetics SystemsBiology
MaintainerMauro Castro <[email protected]>
LicenseGPL (>= 2)
Version1.2.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("geneplast")

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geneplast documentation built on May 31, 2017, 12:52 p.m.