geneplast: Evolutionary and plasticity analysis of orthologous groups

Geneplast is designed for evolutionary and plasticity analysis based on orthologous groups distribution in a given species tree. It uses Shannon information theory and orthologs abundance to estimate the Evolutionary Plasticity Index. Additionally, it implements the Bridge algorithm to determine the evolutionary root of a given gene based on its orthologs distribution.

Package details

AuthorRodrigo Dalmolin, Mauro Castro
Bioconductor views GeneRegulation Genetics SystemsBiology
MaintainerMauro Castro <>
LicenseGPL (>= 2)
Package repositoryView on Bioconductor
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geneplast documentation built on April 29, 2020, 5:05 a.m.