GmapSnpDirectory-class: Class '"GmapSnpDirectory"'
In gmapR: An R interface to the GMAP/GSNAP/GSTRUCT suite
Description
This class represents a directory containig one or more sets of SNPs,
each corresponding to a genome. These SNP databases enable
SNP-tolerant alignment with GMAP and GSNAP. If the underlying files
have not been created, this class provides a means to do so.
Methods
- [[<-
signature(x = "GmapSnpDirectory", i = "ANY", j = "ANY"): ...
- length
signature(x = "GmapSnpDirectory"): ...
- names
signature(x = "GmapSnpDirectory"): ...
- path
signature(object = "GmapSnpDirectory"): ...
Author(s)
Michael Lawrence
gmapR documentation built on Nov. 8, 2020, 5:29 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
This class represents a directory containig one or more sets of SNPs, each corresponding to a genome. These SNP databases enable SNP-tolerant alignment with GMAP and GSNAP. If the underlying files have not been created, this class provides a means to do so.
Methods
- [[<-
signature(x = "GmapSnpDirectory", i = "ANY", j = "ANY"): ...- length
signature(x = "GmapSnpDirectory"): ...- names
signature(x = "GmapSnpDirectory"): ...- path
signature(object = "GmapSnpDirectory"): ...
Author(s)
Michael Lawrence
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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