iCOBRA
Comparison and Visualization of Ranking and Assignment Methods

Package index
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Functions
229
Source code
19
Man pages
52
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iCOBRA: Comparison and Visualization of Ranking and Assignment Methods
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API

API for iCOBRA
Comparison and Visualization of Ranking and Assignment Methods

Global functions
.COBRAData Man page
.COBRAPerformance Man page
.COBRAPlot Man page
COBRAData Man page Source code
COBRAData-class Man page
COBRAData_from_text Man page Source code
COBRAData_to_text Man page Source code
COBRAPerformance Man page Source code
COBRAPerformance-class Man page
COBRAPlot Man page Source code
COBRAPlot,COBRAPerformance-method Man page
COBRAPlot-class Man page
COBRAapp Man page Source code
Extract Man page
[ Man page
[,COBRAData-method Man page
[,COBRAPerformance-method Man page
[,COBRAPlot-method Man page
\S4method{[}{COBRAData,ANY,ANY,ANY} Man page
\S4method{[}{COBRAData,ANY,ANY} Man page
\S4method{[}{COBRAPerformance,ANY,ANY,ANY} Man page
\S4method{[}{COBRAPerformance,ANY,ANY} Man page
\S4method{[}{COBRAPlot,ANY,ANY,ANY} Man page
\S4method{[}{COBRAPlot,ANY,ANY} Man page
basemethods Man page
basemethods,COBRAPerformance-method Man page
basemethods,COBRAPlot-method Man page
calculate_adjp Man page Source code
calculate_performance Man page Source code
check_agreement Source code
cobradata_example Man page
cobradata_example_sval Man page
coerce Man page
coerce, Man page
coerce,COBRAPerformance,COBRAPlot-method Man page
coerce,COBRAPlot,COBRAPerformance-method Man page
corr Man page
corr,COBRAPerformance-method Man page
corr,COBRAPlot-method Man page
corr<- Man page
corr<-,COBRAPerformance,data.frame-method Man page
corr<-,COBRAPlot,data.frame-method Man page
define_colors Source code
deviation Man page
deviation,COBRAPerformance-method Man page
deviation,COBRAPlot-method Man page
deviation<- Man page
deviation<-,COBRAPerformance,data.frame-method Man page
deviation<-,COBRAPlot,data.frame-method Man page
extend_resulttable Source code
facetted Man page
facetted,COBRAPlot-method Man page
facetted<- Man page
facetted<-,COBRAPlot,logical-method Man page
fdrnbr Man page
fdrnbr,COBRAPerformance-method Man page
fdrnbr,COBRAPlot-method Man page
fdrnbr<- Man page
fdrnbr<-,COBRAPerformance,data.frame-method Man page
fdrnbr<-,COBRAPlot,data.frame-method Man page
fdrnbrcurve Man page
fdrnbrcurve,COBRAPerformance-method Man page
fdrnbrcurve,COBRAPlot-method Man page
fdrnbrcurve<- Man page
fdrnbrcurve<-,COBRAPerformance,data.frame-method Man page
fdrnbrcurve<-,COBRAPlot,data.frame-method Man page
fdrtpr Man page
fdrtpr,COBRAPerformance-method Man page
fdrtpr,COBRAPlot-method Man page
fdrtpr<- Man page
fdrtpr<-,COBRAPerformance,data.frame-method Man page
fdrtpr<-,COBRAPlot,data.frame-method Man page
fdrtprcurve Man page
fdrtprcurve,COBRAPerformance-method Man page
fdrtprcurve,COBRAPlot-method Man page
fdrtprcurve<- Man page
fdrtprcurve<-,COBRAPerformance,data.frame-method Man page
fdrtprcurve<-,COBRAPlot,data.frame-method Man page
fix_duplicates Source code
fix_res Source code
fixcolname Source code
fpc Man page
fpc,COBRAPerformance-method Man page
fpc,COBRAPlot-method Man page
fpc<- Man page
fpc<-,COBRAPerformance,data.frame-method Man page
fpc<-,COBRAPlot,data.frame-method Man page
fpr Man page
fpr,COBRAPerformance-method Man page
fpr,COBRAPlot-method Man page
fpr<- Man page
fpr<-,COBRAPerformance,data.frame-method Man page
fpr<-,COBRAPlot,data.frame-method Man page
fsrnbr Man page
fsrnbr,COBRAPerformance-method Man page
fsrnbr,COBRAPlot-method Man page
fsrnbr<- Man page
fsrnbr<-,COBRAPerformance,data.frame-method Man page
fsrnbr<-,COBRAPlot,data.frame-method Man page
fsrnbrcurve Man page
fsrnbrcurve,COBRAPerformance-method Man page
fsrnbrcurve,COBRAPlot-method Man page
fsrnbrcurve<- Man page
fsrnbrcurve<-,COBRAPerformance,data.frame-method Man page
fsrnbrcurve<-,COBRAPlot,data.frame-method Man page
gen_thr_vec Source code
get_coltype Source code
get_curve Source code
get_curve_cont Source code
get_keepfeatures Source code
get_keeplevels Source code
is_plottable Source code
isinvalidpalette Source code
maxsplit Man page
maxsplit,COBRAPerformance-method Man page
maxsplit,COBRAPlot-method Man page
maxsplit<- Man page
maxsplit<-,COBRAPerformance,numeric-method Man page
maxsplit<-,COBRAPlot,numeric-method Man page
onlyshared Man page
onlyshared,COBRAPerformance-method Man page
onlyshared,COBRAPlot-method Man page
onlyshared<- Man page
onlyshared<-,COBRAPerformance,logical-method Man page
onlyshared<-,COBRAPlot,logical-method Man page
overlap Man page
overlap,COBRAPerformance-method Man page
overlap,COBRAPlot-method Man page
overlap<- Man page
overlap<-,COBRAPerformance,list_df-method Man page
overlap<-,COBRAPlot,list_df-method Man page
padj Man page
padj,COBRAData-method Man page
padj<- Man page
padj<-,COBRAData,data.frame-method Man page
plot_corr Man page Source code
plot_deviation Man page Source code
plot_fdrcurve Source code
plot_fdrnbrcurve Man page Source code
plot_fdrtprcurve Man page Source code
plot_fpc Man page Source code
plot_fpr Man page Source code
plot_fpr_tpr Source code
plot_fsrnbrcurve Man page Source code
plot_overlap Man page Source code
plot_roc Man page Source code
plot_roc_fpc Source code
plot_scatter Man page Source code
plot_theme Source code
plot_tpr Man page Source code
plot_upset Man page Source code
plotcolors Man page
plotcolors,COBRAPlot-method Man page
plotcolors<- Man page
plotcolors<-,COBRAPlot,character-method Man page
prepare_data_for_plot Man page Source code
pval Man page
pval,COBRAData-method Man page
pval<- Man page
pval<-,COBRAData,data.frame-method Man page
reorder_levels Man page Source code
res_check Source code
roc Man page
roc,COBRAPerformance-method Man page
roc,COBRAPlot-method Man page
roc<- Man page
roc<-,COBRAPerformance,data.frame-method Man page
roc<-,COBRAPlot,data.frame-method Man page
scatter Man page
scatter,COBRAPerformance-method Man page
scatter,COBRAPlot-method Man page
scatter<- Man page
scatter<-,COBRAPerformance,data.frame-method Man page
scatter<-,COBRAPlot,data.frame-method Man page
score Man page
score,COBRAData-method Man page
score<- Man page
score<-,COBRAData,data.frame-method Man page
select_measure Source code
splv Man page
splv,COBRAPerformance-method Man page
splv,COBRAPlot-method Man page
splv<- Man page
splv<-,COBRAPerformance,character-method Man page
splv<-,COBRAPlot,character-method Man page
stratiflevels Man page
stratiflevels,COBRAPerformance-method Man page
stratiflevels,COBRAPlot-method Man page
sval Man page
sval,COBRAData-method Man page
sval<- Man page
sval<-,COBRAData,data.frame-method Man page
symdiff Source code
tpr Man page
tpr,COBRAPerformance-method Man page
tpr,COBRAPlot-method Man page
tpr<- Man page
tpr<-,COBRAPerformance,data.frame-method Man page
tpr<-,COBRAPlot,data.frame-method Man page
truth Man page
truth,COBRAData-method Man page
truth<- Man page
truth<-,COBRAData,data.frame-method Man page
update_cobradata Man page Source code
update_cobraperformance Man page Source code
iCOBRA documentation built on April 17, 2021, 6:07 p.m.

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