onlyshared: Accessor and replacement functions for 'onlyshared' slot

In iCOBRA: Comparison and Visualization of Ranking and Assignment Methods

Description

Accessor and replacement functions for the onlyshared slot in a COBRAPerformance or COBRAPlot object.

Usage

onlyshared(x, ...)

onlyshared(x, ...) <- value

## S4 method for signature 'COBRAPerformance'
onlyshared(x)

## S4 replacement method for signature 'COBRAPerformance,logical'
onlyshared(x) <- value

## S4 replacement method for signature 'COBRAPlot,logical'
onlyshared(x) <- value

Arguments

x	A COBRAPerformance or COBRAPlot object.
...	Additional arguments.
value	A logical indicating whether only features that are shared between result and truth are retained, or if all features in the truth are used.

Value

The accessor function returns a logical indicating whether only features that are shared between result and truth are retained, or if all features in the truth are used.

Author(s)

Charlotte Soneson

Examples

data(cobradata_example)
cobraperf <- calculate_performance(cobradata_example,
                                   binary_truth = "status",
                                   aspects = "fdrtpr")
head(onlyshared(cobraperf))

iCOBRA documentation built on April 17, 2021, 6:07 p.m.