scatter: Accessor and replacement functions for 'scatter' slot

In iCOBRA: Comparison and Visualization of Ranking and Assignment Methods

Description

Accessor and replacement functions for the scatter slot in a COBRAPerformance or COBRAPlot object.

Usage

scatter(x, ...)

scatter(x, ...) <- value

## S4 method for signature 'COBRAPerformance'
scatter(x)

## S4 replacement method for signature 'COBRAPerformance,data.frame'
scatter(x) <- value

## S4 replacement method for signature 'COBRAPlot,data.frame'
scatter(x) <- value

Arguments

x	A COBRAPerformance or COBRAPlot object.
...	Additional arguments.
value	A data frame giving information necessary to generate scatter plots of observed vs true values for each method and each stratification level.

Value

The accessor function returns a data frame giving information necessary to generate scatter plots of observed vs true values for each method and each stratification level.

Author(s)

Charlotte Soneson

Examples

data(cobradata_example)
cobraperf <- calculate_performance(cobradata_example, cont_truth = "logFC",
                                   aspects = "scatter")
head(scatter(cobraperf))

iCOBRA documentation built on April 17, 2021, 6:07 p.m.