Description Features Fields Accesors SelectVargeneralfunctions SelectVargeneralfunctions Author(s) References See Also Examples
Class SelectVar
S4 class (kimod: ktables approach to integrate multiple OmicsData
Multiple dataset)
SelectVar to DiStatis object.
SelectVar (Generate a biplot making linear model of all variables over the Compromise Matrix)
Plotting Biplot.
Plotting BiplotGroup.
Coord.Select matrix are coordenates (Betas) of selected variables.
Table.Select return to the data frame with all variables selected (from all studies or tables)
List.Selec.Var return to the character with the names of all variables selected.
List.Selec.Est list of all variables selected (with its respective table)
Compromise.Coords Coords of projected observations in compromise matrix.
Coord.Select(x)
, Coord.Select(x) < value
: matrix are coordenates (Betas) of selected variables.
Table.Select(x)
, Table.Select(x) < value
:return to the data frame with all variables selected (from all studies or tables)
List.Selec.Var(x)
, List.Selec.Var(x)) < value
:return to the character with the names of all variables selected.
List.Selec.Est(x)
, List.Selec.Est(x)) < value
:return to the character with the names of all variables selected. list of all variables selected (with its respective table)
Generated basic output for SelectVar class
Generated basic statistics for SelectVar class
Getters for their respective slots.
Basic output for SelectVar class
Basic statistics for SelectVar class
M L Zingaretti, J A DemeyZambrano, J L Vicente Villardon, J R Demey
Demey, J., VicenteVillardon, J. L., Galindo, M.P. & Zambrano, A. (2008) Identifying Molecular Markers Associated With Classification Of Genotypes Using External Logistic Biplots. Bioinformatics, 24(24), 28322838.
Gabriel, K. (1971). The biplot graphic display of matrices with application to principal component analysis. Biometrika 58(3), 453–467.
Gower, J. & Hand, D. (1996). Biplots, Monographs on statistics and applied probability. 54. London: Chapman and Hall., 277 pp.
Biplot
, and additional related
SelectVar class functions.
1  showClass("SelectVar")

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