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The mdgsa
library implements the gene set analysis methodology developed in
Montaner and Dopazo 2010.
It presents a flexible framework for analyzing the enrichment
of gene sets along a given ranking of genes.
The novelty is that,
not just one ranking index but two,
may be analyzed and jointly explored
in a multidimensional gene set analysis.
Development version is available in GitHub: https://github.com/dmontaner/mdgsa
You can install the development version form your R session doing:
library (devtools)
install_github ("dmontaner/mdgsa")
Vignette - PDF format - MD format (readable in GitHub)
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