README.md

MultiDimensional Gene Set Analysis

About

The mdgsa library implements the gene set analysis methodology developed in Montaner and Dopazo 2010. It presents a flexible framework for analyzing the enrichment of gene sets along a given ranking of genes. The novelty is that, not just one ranking index but two, may be analyzed and jointly explored in a multidimensional gene set analysis.

Install

Development version is available in GitHub: https://github.com/dmontaner/mdgsa

You can install the development version form your R session doing:

library (devtools)
install_github ("dmontaner/mdgsa")

Documentation

Vignette - PDF format - MD format (readable in GitHub)



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mdgsa documentation built on Nov. 8, 2020, 5:05 p.m.