getOntology: Get GO term Ontology
In mdgsa: Multi Dimensional Gene Set Analysis.
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
Finds the ontology of a term from its id.
Usage
1
getOntology(x, verbose = TRUE)
Arguments
x
a character vector of GO ids.
verbose
verbose.
Details
Uses the library GO.db.
x may be a data.frame.
In such case, GO ids are expected in its row names.
Value
A character vector with the corresponding GO names.
Author(s)
David Montaner dmontaner@cipf.es
See Also
getGOnames, propagateGO,
goLeaves, splitOntologies,
getKEGGnames
Examples
1
getOntology (c("GO:0000018", "GO:0005788", "BAD_GO"))
mdgsa documentation built on Nov. 8, 2020, 5:05 p.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
Finds the ontology of a term from its id.
Usage
1 | getOntology(x, verbose = TRUE)
|
Arguments
x |
a character vector of GO ids. |
verbose |
verbose. |
Details
Uses the library GO.db.
x may be a data.frame.
In such case, GO ids are expected in its row names.
Value
A character vector with the corresponding GO names.
Author(s)
David Montaner dmontaner@cipf.es
See Also
getGOnames, propagateGO,
goLeaves, splitOntologies,
getKEGGnames
Examples
1 | getOntology (c("GO:0000018", "GO:0005788", "BAD_GO"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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