compute_perturbed_genes: Compute perturbed genes Find the top fraction of genes that...
In mdp: Molecular Degree of Perturbation calculates scores for transcriptome data samples based on their perturbation from controls
Description
Usage
Arguments
Value
Description
Compute perturbed genes
Find the top fraction of genes that are more perturbed
in test versus controls
Usage
1
compute_perturbed_genes(gmdp_results, control_lab, fraction_genes)
Arguments
gmdp_results
results table of gene scores
control_lab
label specificying control class
fraction_genes
fraction of top perturbed genes that
will make the set of perturbed genes
Value
vector of perturbed genes
mdp documentation built on Nov. 8, 2020, 7:51 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Compute perturbed genes Find the top fraction of genes that are more perturbed in test versus controls
Usage
1 | compute_perturbed_genes(gmdp_results, control_lab, fraction_genes)
|
Arguments
gmdp_results |
results table of gene scores |
control_lab |
label specificying control class |
fraction_genes |
fraction of top perturbed genes that will make the set of perturbed genes |
Value
vector of perturbed genes
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.