dataClean: dataClean

Description Usage Arguments Value Author(s) Examples

Description

dataClean

Usage

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dataClean(para, valueID = "value", sd.factor = 3, snr = 1, ...)

Arguments

para

A metaXpara object.

valueID

The name of the column used

sd.factor

The factor used to filter peak based on SD

snr

The threshold to filter peak

...

Other argument

Value

A metaXpara object.

Author(s)

Bo Wen wenbo@genomics.cn

Examples

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para <- new("metaXpara")
pfile <- system.file("extdata/MTBLS79.txt",package = "metaX")
sfile <- system.file("extdata/MTBLS79_sampleList.txt",package = "metaX")
rawPeaks(para) <- read.delim(pfile,check.names = FALSE)
sampleListFile(para) <- sfile
para <- reSetPeaksData(para)
p <- dataClean(para)

metaX documentation built on Oct. 5, 2016, 4:41 a.m.

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