dataClean: dataClean

In metaX: An R package for metabolomic data analysis

Description

dataClean

Usage

dataClean(para, valueID = "value", sd.factor = 3, snr = 1, ...)

Arguments

para	A metaXpara object.
valueID	The name of the column used
sd.factor	The factor used to filter peak based on SD
snr	The threshold to filter peak
...	Other argument

Value

A metaXpara object.

Author(s)

Bo Wen [e-mail]

Examples

para <- new("metaXpara")
pfile <- system.file("extdata/MTBLS79.txt",package = "metaX")
sfile <- system.file("extdata/MTBLS79_sampleList.txt",package = "metaX")
rawPeaks(para) <- read.delim(pfile,check.names = FALSE)
sampleListFile(para) <- sfile
para <- reSetPeaksData(para)
p <- dataClean(para)

metaX documentation built on Oct. 5, 2016, 4:41 a.m.