pathwayAnalysis: Pathway analysis
In metaX: An R package for metabolomic data analysis
Description
Usage
Arguments
Value
Examples
Description
Pathway analysis
Usage
1
pathwayAnalysis(id, id.type = "hmdb", outfile)
Arguments
id
A vector of metabolite IDs
id.type
The type of metabolite ID type, default is hmdb.
outfile
The output file name
Value
A data.frame object
Examples
1
2
3
4
5
6
## Not run:
res <- pathwayAnalysis(id=c("HMDB00060","HMDB00056","HMDB00064"),
outfile="pathway.csv")
head(res)
## End(Not run)
metaX documentation built on Oct. 5, 2016, 4:41 a.m.
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Description Usage Arguments Value Examples
Description
Pathway analysis
Usage
1 | pathwayAnalysis(id, id.type = "hmdb", outfile)
|
Arguments
id |
A vector of metabolite IDs |
id.type |
The type of metabolite ID type, default is hmdb. |
outfile |
The output file name |
Value
A data.frame object
Examples
1 2 3 4 5 6 | ## Not run:
res <- pathwayAnalysis(id=c("HMDB00060","HMDB00056","HMDB00064"),
outfile="pathway.csv")
head(res)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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