plot_stats: Plot descriptive statistics
In methrix: Fast and efficient summarization of generic bedGraph files from Bisufite sequencing

Plot descriptive statistics

plot_stats(
  plot_dat,
  what = "M",
  stat = "mean",
  ignore_chr = NULL,
  samples = NULL,
  n_col = NULL,
  n_row = NULL
)

`plot_dat`	results from `get_stats`
`what`	Can be `M` or `C`. Default `M`
`stat`	Can be `mean` or `median`. Default `mean`
`ignore_chr`	Chromsomes to ignore. Default `NULL`
`samples`	Use only these samples. Default `NULL`
`n_col`	number of columns. Passed to 'facet_wrap'
`n_row`	number of rows. Passed to 'facet_wrap'

plot descriptive statistics results from get_stats

ggplot2 object

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data('methrix_data')
gs = get_stats(methrix_data)
plot_stats(gs)

methrix documentation built on Feb. 13, 2021, 2 a.m.

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