miRSM: Inferring miRNA sponge modules by integrating expression data and miRNA-target binding information

The package aims to identify miRNA sponge modules by integrating expression data and miRNA-target binding information. It provides several functions to study miRNA sponge modules, including popular methods for inferring gene modules (candidate miRNA sponge modules), and a function to identify miRNA sponge modules, as well as several functions to conduct modular analysis of miRNA sponge modules.

Package details

AuthorJunpeng Zhang [aut, cre]
Bioconductor views BiomedicalInformatics Clustering GeneExpression GeneRegulation GeneSetEnrichment GeneTarget Microarray Software
MaintainerJunpeng Zhang <[email protected]>
LicenseGPL-3
Version1.4.1
URL https://github.com/zhangjunpeng411/miRSM
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("miRSM")

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miRSM documentation built on Feb. 4, 2020, 2 a.m.