Description Usage Format Value Author(s) References
The peerj32 data set contains high-through profiling data from 389 human blood serum lipids and 130 intestinal genus-level bacteria from 44 samples (22 subjects from 2 time points; before and after probiotic/placebo intervention). The data set can be used to investigate associations between intestinal bacteria and host lipid metabolism. For details, see http://dx.doi.org/10.7717/peerj.32.
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List of the following data matrices as described in detail in Lahti et al. (2013):
lipids: Quantification of 389 blood serum lipids across 44 samples
microbes: Quantification of 130 genus-like taxa across 44 samples
meta: Sample metadata including time point, sex, subjectID, sampleID and treatment group (probiotic LGG / Placebo)
phyloseq The microbiome data set converted into a
phyloseq-class
object.
Loads the data set in R.
Leo Lahti microbiome-admin@googlegroups.com
Lahti et al. (2013) PeerJ 1:e32 http://dx.doi.org/10.7717/peerj.32
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