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inst/scripts/get_augmented_pathways.R
In mirIntegrator: Integrating microRNA expression into signaling pathways for pathway analysis
# The following script constructs the augmented_pathways dataset
# included in the mirIntegrator package.
# This dataset is included only for demostration purposes.
require("mirIntegrator")
data(mirTarBase)
data(kegg_pathways)
augmented_pathways <- integrate_mir(kegg_pathways, mirTarBase)
save(augmented_pathways, file = "augmented_pathways.rda")
library(tools)
resaveRdaFiles("augmented_pathways.rda")
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mirIntegrator documentation built on Nov. 8, 2020, 8:28 p.m.
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# The following script constructs the augmented_pathways dataset
# included in the mirIntegrator package.
# This dataset is included only for demostration purposes.
require("mirIntegrator")
data(mirTarBase)
data(kegg_pathways)
augmented_pathways <- integrate_mir(kegg_pathways, mirTarBase)
save(augmented_pathways, file = "augmented_pathways.rda")
library(tools)
resaveRdaFiles("augmented_pathways.rda")
Try the mirIntegrator package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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