pwmType: pwmType
In motifmatchr: Fast Motif Matching in R
Description
Usage
Arguments
Value
Examples
Description
Determines type of PWM
Usage
1
pwmType(pwm)
Arguments
pwm
PWMatrix object
Value
'log','log2', or 'frequency' depending on type of pwm
Examples
1
2
3
data(example_motifs, package = "motifmatchr")
pwmType(TFBSTools::toPWM(example_motifs[[1]]))
pwmType(TFBSTools::toPWM(example_motifs[[1]], type = "prob"))
motifmatchr documentation built on Nov. 8, 2020, 8:09 p.m.
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Description Usage Arguments Value Examples
Description
Determines type of PWM
Usage
1 | pwmType(pwm)
|
Arguments
pwm |
PWMatrix object |
Value
'log','log2', or 'frequency' depending on type of pwm
Examples
1 2 3 | data(example_motifs, package = "motifmatchr")
pwmType(TFBSTools::toPWM(example_motifs[[1]]))
pwmType(TFBSTools::toPWM(example_motifs[[1]], type = "prob"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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