pwmType: pwmType

Description Usage Arguments Value Examples

View source: R/utils.R

Description

Determines type of PWM

Usage

1
pwmType(pwm)

Arguments

pwm

PWMatrix object

Value

'log','log2', or 'frequency' depending on type of pwm

Examples

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data(example_motifs, package = "motifmatchr")
pwmType(TFBSTools::toPWM(example_motifs[[1]]))
pwmType(TFBSTools::toPWM(example_motifs[[1]], type = "prob"))

motifmatchr documentation built on Nov. 1, 2018, 3:51 a.m.