motifmatchr: Fast Motif Matching in R

Quickly find motif matches for many motifs and many sequences. Wraps C++ code from the MOODS motif calling library, which was developed by Pasi Rastas, Janne Korhonen, and Petri Martinmäki.

Getting started

Package details

AuthorAlicia Schep [aut, cre], Stanford University [cph]
Bioconductor views MotifAnnotation
MaintainerAlicia Schep <[email protected]>
LicenseGPL-3 + file LICENSE
Version1.4.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("motifmatchr")

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motifmatchr documentation built on Nov. 1, 2018, 3:51 a.m.