bcm: Breast cancer metastases from different anatomical sites

In oppar: Outlier profile and pathway analysis in R

Description

An ExpressionSet object containing trimmed GSE46141 data. The object contains gene expression measurements on local breast tumours and liver, lymph node, skin local- regional etc metastatic tumours. Contains 9503 features and 80 samples (ascite, bone, lung and skin samples were removed).

Usage

data(GSE46141)

Format

Contains gene expression matrix, phenotype (pData) and feature (fData) data:

ID

In fData(e) – probe IDs

EntrezGeneID

In fData(e) – Entrez Ids

GeneSymbol

In fData(e) – Gene Symbols

geo_accession

In pData(e) – GEO accession IDs

source_name_ch1

In pData(e) – Sample information

Value

An ExpressionSet object

Source

http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE46141

oppar documentation built on Nov. 8, 2020, 7:37 p.m.