eset: Tomlins et al. Prostate Cancer data (GEO: GSE6099)

In oppar: Outlier profile and pathway analysis in R

Description

An ExpressionSet object containing microarray gene expression measurements on normal tissue and metastatic prostate cancer tumoures, and the corresponsing feature and phynotypic meta data.

Usage

data(tomlins)

Format

An ExpressionSet object with 10945 features and 86 samples.

title

In pData(eset) – Sample names

geo_accession

In pData(eset) –GEO accession numbers

characteristics_ch1

In pData(eset) – sample description

ID

In fData(eset) – probes Ids

Gene.title

...

Gene.symbol

In fData(eset) – Gene Symbol

Gene.ID

In fData(eset) – Entrez Gene IDs

Value

An ExpressionSet object

Source

http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6099

oppar documentation built on Nov. 8, 2020, 7:37 p.m.