Files in pcaMethods

A collection of PCA methods

README.md R/optiAlgCgd.R R/BPCA_initmodel.R R/ppca.R R/nipalsPca.R R/repmat.R R/robustPca.R R/pca.R R/AllGenerics.R R/orth.R R/BPCA_dostep.R R/checkData.R R/sortFeatures.R R/derrorHierarchic.R R/forkNlpcaNet.R R/kEstimate.R R/lineSearch.R R/llsImpute.R R/methods-pcaRes.R R/methods-nniRes.R R/pcaMethods-package.R R/errorHierarchic.R R/svdImpute.R R/nlpca.R R/xval.R R/AllClasses.R R/methods-ExpressionSet.R R/kEstimateFast.R R/bpca.R R/prep.R R/vector2matrices.R man/loadings.pcaRes.Rd man/show-methods.Rd man/BPCA_dostep.Rd man/loadings-pcaRes-method.Rd man/simpleEllipse.Rd man/listPcaMethods.Rd man/plot.pcaRes.Rd man/svdImpute.Rd man/llsImpute.Rd man/helix.Rd man/sDev-pcaRes-method.Rd man/showNniRes.Rd man/asExprSet.Rd man/pcaRes.Rd man/vector2matrices-matrix-method.Rd man/lineSearch.Rd man/plotPcs.Rd man/deletediagonals.Rd man/vector2matrices-nlpcaNet-method.Rd man/bpca.Rd man/forkNlpcaNet.Rd man/loadings-ANY-method.Rd man/errorHierarchic.Rd man/optiAlgCgd.Rd man/BPCA_initmodel.Rd man/method-pcaRes-method.Rd man/metaboliteData.Rd man/robustPca.Rd man/nmissing-pcaRes-method.Rd man/weightsAccount.Rd man/R2VX-pcaRes-method.Rd man/predict-methods.Rd man/nP-pcaRes-method.Rd man/center-pcaRes-method.Rd man/pcaMethods.Rd man/kEstimate.Rd man/ppca.Rd man/robustSvd.Rd man/leverage-pcaRes-method.Rd man/cvstat-pcaRes-method.Rd man/pca.Rd man/Q2.Rd man/completeObs-nniRes-method.Rd man/derrorHierarchic.Rd man/centered-pcaRes-method.Rd man/biplot-methods.Rd man/prep.Rd man/orth.Rd man/sortFeatures.Rd man/DModX-pcaRes-method.Rd man/getHierarchicIdx.Rd man/pcaMethods-deprecated.Rd man/slplot-pcaRes-method.Rd man/rediduals-methods.Rd man/dim.pcaRes.Rd man/tempFixNas.Rd man/kEstimateFast.Rd man/repmat.Rd man/nipalsPca.Rd man/scaled-pcaRes-method.Rd man/checkData.Rd man/nPcs-pcaRes-method.Rd man/summary.Rd man/RnipalsPca.Rd man/pcaNet.Rd man/nObs-pcaRes-method.Rd man/scl-pcaRes-method.Rd man/scores-pcaRes-method.Rd man/nni.Rd man/scores.pcaRes.Rd man/linr.Rd man/nniRes.Rd man/svdPca.Rd man/metaboliteDataComplete.Rd man/wasna-pcaRes-method.Rd man/nVar-pcaRes-method.Rd man/nlpca.Rd man/fitted-methods.Rd man/R2cum-pcaRes-method.Rd man/cvseg.Rd inst/doc/pcaMethods.R inst/doc/outliers.R inst/doc/outliers.pdf inst/doc/missingValues.pdf inst/doc/pcaMethods.pdf inst/doc/missingValues.R