API for phantasus
Visual and interactive gene expression analysis
| Global functions | |
|---|---|
| adjustDataset | Man page |
| annotationDBMeta | Man page |
| calcPCA | Man page Source code |
| calculatedAnnotation | Man page |
| checkGPLs | Source code |
| checkGPLsFallback | Man page Source code |
| colMeansByGroups | Man page Source code |
| collapseDataset | Man page |
| convertByAnnotationDB | Man page |
| createES | Man page Source code |
| es | Man page |
| fgseaExample | Man page |
| filterFeatureAnnotations | Source code |
| filterPhenoAnnotations | Source code |
| generatePreloadedSession | Man page |
| getArchs4Files | Man page Source code |
| getES | Man page Source code |
| getGDS | Man page Source code |
| getGSE | Man page Source code |
| getIndicesVector | Source code |
| gseaPlot | Man page Source code |
| inferCondition | Source code |
| inferConditionImpl | Source code |
| limmaAnalysis | Man page Source code |
| limmaAnalysisImpl | Source code |
| listCachedESs | Source code |
| loadFromARCHS4 | Man page Source code |
| loadGEO | Man page Source code |
| loadPreloaded | Man page Source code |
| makeAnnotated | Source code |
| parseBriefData | Source code |
| performKmeans | Man page Source code |
| queryAnnotationDBMeta | Man page |
| rasterizeHeatmap | Source code |
| read.gct | Man page Source code |
| read.tsv | Source code |
| removeRepeatWords | Source code |
| reparseCachedESs | Man page Source code |
| reproduceInR | Man page |
| servePhantasus | Man page Source code |
| sessionExists | Source code |
| shinyGAMAnalysis | Man page Source code |
| subsetES | Man page Source code |
| take | Source code |
| write.gct | Man page Source code |
| writeToList | Source code |
