limmaAnalysis: Differential Expression analysis.

Description Usage Arguments Value Examples

View source: R/limmaAnalysis.R

Description

limmaAnalysis performs differential expression analysis from limma package and returns a ProtoBuf-serialized resulting de-matrix.

Usage

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limmaAnalysis(es, fieldValues)

Arguments

es

ExpressionSet object. It should be normalized for more accurate analysis.

fieldValues

Vector of comparison values, mapping categories' names to columns/samples

Value

Name of the file containing serialized de-matrix.

Examples

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## Not run: 
data(es)
limmaAnalysis(es, fieldValues = c("A", "A", "A", "B", "B"))

## End(Not run)

phantasus documentation built on Nov. 8, 2020, 6:39 p.m.