convertByAnnotationDB: Map indexes using Annotation DB
In phantasus: Visual and interactive gene expression analysis
Description
Usage
Arguments
Value
Description
createES function creates an rds file containing meta information of
provided sqlite files for AnnotationDB
Usage
1
convertByAnnotationDB(es, dbName, columnName, columnType, keyType)
Arguments
es
source ExpressionSet
dbName
name of AnnotationDB file
columnName
name of column in featureData of source ExpressionSet
columnType
Type of indexes in columnName
keyType
Type of mapped indexes
Value
JSON object with a vector of converted IDs
phantasus documentation built on Nov. 8, 2020, 6:39 p.m.
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Description Usage Arguments Value
Description
createES function creates an rds file containing meta information of
provided sqlite files for AnnotationDB
Usage
1 | convertByAnnotationDB(es, dbName, columnName, columnType, keyType)
|
Arguments
es |
source ExpressionSet |
dbName |
name of AnnotationDB file |
columnName |
name of column in featureData of source ExpressionSet |
columnType |
Type of indexes in columnName |
keyType |
Type of mapped indexes |
Value
JSON object with a vector of converted IDs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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