API for philr
Phylogenetic partitioning based ILR transform for metagenomics data

Global functions
annotate_balance Man page Source code
blw.mean.descendants.sum.children Source code
blw.sum.children Source code
build.phylo.ilr Man page
buildilrBasep Man page Source code
calc.blw Man page
calculate.blw Man page Source code
check.zeroes Source code
clrp Man page Source code
clrpInv Man page Source code
convert_to_long Man page Source code
g.colMeans Man page Source code
g.rowMeans Man page Source code
get.ud.nodes Source code
get.ud.tips Source code
ilrp Man page Source code
ilrpInv Man page Source code
inner.prodp Source code
mean_dist_to_tips Man page Source code
miniclo Man page Source code
name.balance Man page Source code
name.to.nn Man page Source code
name_nodenumber_conversion Man page
named_rtree Man page Source code
nn.to.name Man page Source code
normp Source code
philr Man page Source code
philrInv Man page Source code
phylo2sbp Man page Source code
shift Man page
shiftp Man page Source code
shiftpInv Man page Source code
tally.votes Source code
vec_to_mat Source code
vote.annotation Source code
philr documentation built on Nov. 17, 2017, 11:40 a.m.