head(gsa_input$gsc,10) head(gsa_input$pvals, 10) head(gsa_input$directions, 10)
geneSets <- loadGSC(gsa_input$gsc) geneSets
gsares <- runGSA(gsa_input$pvals, gsa_input$directions, gsc = geneSets, nPerm = 500) # set to 500 for fast run
nPerm was set to 500 to get a short runtime for this vignette, in reality use a higher number, e.g. 10,000 (default).
This opens a browser window with an interactive interface where the results can be explored in detail.
Here is the output of
sessionInfo() on the system on which this document was compiled.
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.