gsa_input: Random input data for gene set analysis

Description Format

Description

This data set is completely randomly generated and contains p-values for 2000 genes, fold-changes for those genes and a gene set collection giving the connection between genes and 50 gene sets. Only intended to be used as example data for runGSA.

Format

A list containing 3 elements: gsa_input$pvals and gsa_input$directions are numeric vectors, gsa_input$gsc is a two-column matrix with gene names in the first column and gene set names in the second.


piano documentation built on Nov. 1, 2018, 2:23 a.m.