plotMeanVar: Mean variance plot

In qPLEXanalyzer: Tools for qPLEX-RIME data analysis

Description

Computes and plots variance v mean intensity for peptides in MSnset

Usage

plotMeanVar(MSnSetObj, title = "")

Arguments

MSnSetObj	MSnSet; an object of class MSnSet
title	character: title for the plot

Value

An object created by ggplot

Examples

data(human_anno)
data(exp3_OHT_ESR1)
MSnSet_data <- convertToMSnset(exp3_OHT_ESR1$intensities_qPLEX1, 
                               metadata=exp3_OHT_ESR1$metadata_qPLEX1,
                               indExpData=c(7:16), 
                               Sequences=2, 
                               Accessions=6)
plotMeanVar(MSnSet_data, title="Mean_Variance")

qPLEXanalyzer documentation built on Feb. 3, 2021, 2:01 a.m.