R/global.R

In rGREAT: Client for GREAT Analysis

DEFAULT_VERSION = "4.0.4"


BASE_URL_LIST = c("default" = "http://great.stanford.edu/public/cgi-bin",
	         "4.0.4" = "http://great.stanford.edu/public-4.0.4/cgi-bin",
	         "3.0.0" = "http://great.stanford.edu/public-3.0.0/cgi-bin",
	         "2.0.2" = "http://great.stanford.edu/public-2.0.2/cgi-bin")
BASE_URL_LIST["3.0"] = BASE_URL_LIST["3"] = BASE_URL_LIST["3.0.0"]
BASE_URL_LIST["2.0"] = BASE_URL_LIST["2"] = BASE_URL_LIST["2.0.2"]
BASE_URL_LIST["4.0"] = BASE_URL_LIST["4"] = BASE_URL_LIST["4.0.4"]

SPECIES = list("4.0.4" = c("hg38", "hg19", "mm9", "mm10"),
	           "3.0.0" = c("hg19", "mm9", "mm10", "danRer7"),
	           "2.0.2" = c("hg19", "hg18", "mm9", "danRer7"))
SPECIES$default = SPECIES[[DEFAULT_VERSION]]

SPECIES["4.0"] = SPECIES["4"] = SPECIES["4.0.4"]
SPECIES["3.0"] = SPECIES["3"] = SPECIES["3.0.0"]
SPECIES["2.0"] = SPECIES["2"] = SPECIES["2.0.2"]

rGREAT_env = new.env()
rGREAT_env$LAST_REQUEST_TIME = 0