keggDefinitions: KEGG definitions, modules, and pathways by SomaLogic...

In readat: Functionality to Read and Manipulate SomaLogic ADAT files

Description

A lookup of KEGG (Kyoto Encyclopedia of Genes and Genomes) definitions, modules, and pathways by SomaLogic Aptamer ID.

Format

A list of data frames, each with the following columns.

UniProtId

Character. UniProt ID for the protein target.

KeggId

Character. KEGG ID for the gene that produces the target protein.

KeggDefinition

Character. Description corresponding to the KEGG ID.

KeggCytogenicLocation

Character. KEGG determination of the gene's locus.

References

More information on KEGG can be found at: http://www.kegg.jp/

Examples

head(keggDefinitions)
head(keggModules)
head(keggPathways)

readat documentation built on Oct. 31, 2019, 8:19 a.m.