getChromosomesByOrganism: getChromosomesByOrganism

Description Usage Value See Also Examples

Description

Function to obtain a list of organisms with their canonical and (when applicable) the autosomal chromosome names. This function is not usually used by the end user directly but through the filterChromosomes function.

Usage

1

Value

a list with the organism as keys and the list of available chromosome sets as values

See Also

getGenome, filterChromosomes

Examples

1
2
3
chrsByOrg <- getChromosomesByOrganism() 
chrsByOrg[["hg"]]
chrsByOrg[["hg"]][["autosomal"]]


Search within the regioneR package
Search all R packages, documentation and source code

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.